Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.85■□□□□ 0.45
Scn2aA0A0J9YTW6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.85■□□□□ 0.45
Scn2aA0A0J9YTW6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Iqck-206ENSMUST00000208658 2891 ntBASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 AA386476-201ENSMUST00000098781 1665 ntBASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Gm5874-201ENSMUST00000096101 508 ntBASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2aA0A0J9YTW6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn2aA0A0J9YTW6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.83■□□□□ 0.45
Scn2aA0A0J9YTW6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.83■□□□□ 0.45
Scn2aA0A0J9YTW6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.83■□□□□ 0.45
Scn2aA0A0J9YTW6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.83■□□□□ 0.44
Scn2aA0A0J9YTW6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn2aA0A0J9YTW6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn2aA0A0J9YTW6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn2aA0A0J9YTW6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn2aA0A0J9YTW6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn2aA0A0J9YTW6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn2aA0A0J9YTW6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Scn2aA0A0J9YTW6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn2aA0A0J9YTW6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn2aA0A0J9YTW6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn2aA0A0J9YTW6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn2aA0A0J9YTW6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
Scn2aA0A0J9YTW6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn2aA0A0J9YTW6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.77■□□□□ 0.43
Scn2aA0A0J9YTW6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Scn2aA0A0J9YTW6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn2aA0A0J9YTW6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scn2aA0A0J9YTW6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scn2aA0A0J9YTW6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Gm10849-201ENSMUST00000100397 618 ntBASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn2aA0A0J9YTW6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms