Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-2A0A0G2JF93 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-2A0A0G2JF93 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-2A0A0G2JF93 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav13n-2A0A0G2JF93 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-2A0A0G2JF93 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-2A0A0G2JF93 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-2A0A0G2JF93 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-2A0A0G2JF93 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-2A0A0G2JF93 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-2A0A0G2JF93 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Gm11847-201ENSMUST00000125165 1119 ntBASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-2A0A0G2JF93 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms