Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gm11687-201ENSMUST00000118911 886 ntBASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-2A0A0G2JDF5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav14n-2A0A0G2JDF5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-2A0A0G2JDF5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav14n-2A0A0G2JDF5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms