Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm12251-201ENSMUST00000117893 792 ntBASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm43173-201ENSMUST00000202246 593 ntBASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Spcs1-204ENSMUST00000226782 949 ntBASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv13-1A0A0B4J1P8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-1A0A0B4J1P8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms