Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gm40848-201ENSMUST00000221998 324 ntBASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9-4A0A0B4J1K2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9-4A0A0B4J1K2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm11421-201ENSMUST00000122124 294 ntBASIC14.52□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav9-4A0A0B4J1K2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9-4A0A0B4J1K2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.52□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.52□□□□□ -0.09
Trav9-4A0A0B4J1K2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-4A0A0B4J1K2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.51□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm26833-201ENSMUST00000180899 440 ntBASIC14.51□□□□□ -0.09
Trav9-4A0A0B4J1K2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9-4A0A0B4J1K2 Serp2-204ENSMUST00000228055 705 ntBASIC14.51□□□□□ -0.09
Trav9-4A0A0B4J1K2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav9-4A0A0B4J1K2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav9-4A0A0B4J1K2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9-4A0A0B4J1K2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-4A0A0B4J1K2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav9-4A0A0B4J1K2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-4A0A0B4J1K2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-4A0A0B4J1K2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-4A0A0B4J1K2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-4A0A0B4J1K2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9-4A0A0B4J1K2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms