Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv12-1A0A0B4J1H0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv12-1A0A0B4J1H0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv12-1A0A0B4J1H0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Golph3-202ENSMUST00000226517 2359 ntBASIC17.14■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.13■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.13■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv12-1A0A0B4J1H0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.11■□□□□ 0.33
Trbv12-1A0A0B4J1H0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms