Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Gm7514-201ENSMUST00000209475 934 ntBASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Gm13146-201ENSMUST00000118508 780 ntBASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Gm38205-201ENSMUST00000192243 258 ntBASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.91■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ighv1-43A0A0A6YXN5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.89■□□□□ 0.46
Ighv1-43A0A0A6YXN5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Gm12933-201ENSMUST00000120203 872 ntBASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.88■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-43A0A0A6YXN5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms