Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Smad6-203ENSMUST00000179458 273 ntBASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm26833-201ENSMUST00000180899 440 ntBASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbc1A0A0A6YWV4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbc1A0A0A6YWV4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trbc1A0A0A6YWV4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbc1A0A0A6YWV4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbc1A0A0A6YWV4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbc1A0A0A6YWV4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.77■□□□□ 0.44
Trbc1A0A0A6YWV4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trbc1A0A0A6YWV4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbc1A0A0A6YWV4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbc1A0A0A6YWV4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.77■□□□□ 0.43
Trbc1A0A0A6YWV4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbc1A0A0A6YWV4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbc1A0A0A6YWV4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbc1A0A0A6YWV4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.76■□□□□ 0.43
Trbc1A0A0A6YWV4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbc1A0A0A6YWV4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.76■□□□□ 0.43
Trbc1A0A0A6YWV4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbc1A0A0A6YWV4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trbc1A0A0A6YWV4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbc1A0A0A6YWV4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbc1A0A0A6YWV4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trbc1A0A0A6YWV4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbc1A0A0A6YWV4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbc1A0A0A6YWV4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbc1A0A0A6YWV4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbc1A0A0A6YWV4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbc1A0A0A6YWV4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trbc1A0A0A6YWV4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trbc1A0A0A6YWV4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbc1A0A0A6YWV4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbc1A0A0A6YWV4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbc1A0A0A6YWV4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Gm11421-201ENSMUST00000122124 294 ntBASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbc1A0A0A6YWV4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Trbc1A0A0A6YWV4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbc1A0A0A6YWV4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbc1A0A0A6YWV4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbc1A0A0A6YWV4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trbc1A0A0A6YWV4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbc1A0A0A6YWV4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trbc1A0A0A6YWV4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbc1A0A0A6YWV4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Trbc1A0A0A6YWV4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbc1A0A0A6YWV4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbc1A0A0A6YWV4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbc1A0A0A6YWV4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms