Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav18A0A075B656 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav18A0A075B656 Rps24-207ENSMUST00000224568 714 ntBASIC15.83■□□□□ 0.12
Trav18A0A075B656 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav18A0A075B656 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
Trav18A0A075B656 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav18A0A075B656 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav18A0A075B656 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav18A0A075B656 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav18A0A075B656 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Gm45102-201ENSMUST00000207427 857 ntBASIC15.82■□□□□ 0.12
Trav18A0A075B656 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav18A0A075B656 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.82■□□□□ 0.12
Trav18A0A075B656 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav18A0A075B656 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.81■□□□□ 0.12
Trav18A0A075B656 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav18A0A075B656 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav18A0A075B656 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.79■□□□□ 0.12
Trav18A0A075B656 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav18A0A075B656 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav18A0A075B656 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav18A0A075B656 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav18A0A075B656 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav18A0A075B656 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav18A0A075B656 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.77■□□□□ 0.11
Trav18A0A075B656 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Trav18A0A075B656 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav18A0A075B656 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms