Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-3A0A075B648 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Gm44428-201ENSMUST00000204474 874 ntBASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav12-3A0A075B648 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav12-3A0A075B648 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav12-3A0A075B648 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12-3A0A075B648 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12-3A0A075B648 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Gm45855-201ENSMUST00000212546 880 ntBASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12-3A0A075B648 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms