Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Gm16437-201ENSMUST00000025669 507 ntBASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8-1A0A075B641 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8-1A0A075B641 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Gm11687-201ENSMUST00000118911 886 ntBASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8-1A0A075B641 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8-1A0A075B641 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms