Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12n-2A0A075B626 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trav12n-2A0A075B626 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12n-2A0A075B626 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12n-2A0A075B626 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav12n-2A0A075B626 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12n-2A0A075B626 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12n-2A0A075B626 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12n-2A0A075B626 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav12n-2A0A075B626 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav12n-2A0A075B626 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12n-2A0A075B626 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12n-2A0A075B626 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Trav12n-2A0A075B626 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12n-2A0A075B626 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12n-2A0A075B626 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12n-2A0A075B626 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms