Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Spcs1-204ENSMUST00000226782 949 ntBASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav1A0A075B5Z4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav1A0A075B5Z4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav1A0A075B5Z4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Gm43137-201ENSMUST00000198052 594 ntBASIC18■□□□□ 0.47
Trav1A0A075B5Z4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Trav1A0A075B5Z4 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav1A0A075B5Z4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav1A0A075B5Z4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Gm12251-201ENSMUST00000117893 792 ntBASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav1A0A075B5Z4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav1A0A075B5Z4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms