Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Usp28-201ENSMUST00000047349 4133 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm45440-201ENSMUST00000209826 1655 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Hmgb3O54879 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm9372-201ENSMUST00000168454 430 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm17192-201ENSMUST00000169031 511 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm29599-201ENSMUST00000185285 422 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm44640-201ENSMUST00000206894 247 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC7.84□□□□□ -1.15
Hmgb3O54879 CT025689.5-201ENSMUST00000224316 986 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 n-R5s185-201ENSMUST00000083953 119 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Wdhd1-202ENSMUST00000111792 4174 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm43457-201ENSMUST00000200867 2409 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb3O54879 AC166361.2-201ENSMUST00000219269 1415 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm37859-201ENSMUST00000195529 2173 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 1700084J12Rik-202ENSMUST00000187707 1992 ntBASIC7.84□□□□□ -1.15
Hmgb3O54879 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Hmgb3O54879 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmgb3O54879 Gm34280-201ENSMUST00000208250 2114 ntTSL 5 BASIC7.84□□□□□ -1.16
Hmgb3O54879 Rgs6-201ENSMUST00000101234 1368 ntTSL 5 BASIC7.84□□□□□ -1.16
Hmgb3O54879 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Hmgb3O54879 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC7.84□□□□□ -1.16
Hmgb3O54879 Olfr297-202ENSMUST00000172965 1928 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Hmgb3O54879 Myo6-212ENSMUST00000184480 4139 ntTSL 5 BASIC7.84□□□□□ -1.16
Hmgb3O54879 Gm44639-201ENSMUST00000205859 3009 ntBASIC7.84□□□□□ -1.16
Hmgb3O54879 Vgll3-202ENSMUST00000227997 1383 ntBASIC7.84□□□□□ -1.16
Hmgb3O54879 Mark3-206ENSMUST00000221459 2807 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.16
Hmgb3O54879 Gm37873-201ENSMUST00000194571 2280 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Sec31a-210ENSMUST00000182886 4047 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Def8-202ENSMUST00000065534 3127 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Pnp-201ENSMUST00000178092 1306 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm4865-201ENSMUST00000196284 1309 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Eny2-201ENSMUST00000060652 3000 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Vmn2r56-201ENSMUST00000163852 2340 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm10286-201ENSMUST00000093603 5077 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm12014-201ENSMUST00000120164 1620 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Eif2d-201ENSMUST00000068791 3316 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Arhgef10l-205ENSMUST00000105798 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm9266-201ENSMUST00000117401 484 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm12516-201ENSMUST00000120819 385 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm12161-201ENSMUST00000121454 361 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm11354-201ENSMUST00000121974 422 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s14-201ENSMUST00000122688 107 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm7799-201ENSMUST00000133080 476 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm23647-201ENSMUST00000175042 109 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Rn5s-201ENSMUST00000177555 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s108-201ENSMUST00000177575 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s121-201ENSMUST00000177589 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s146-201ENSMUST00000177889 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm22109-201ENSMUST00000177995 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm22291-201ENSMUST00000178027 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s141-201ENSMUST00000178066 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm23284-201ENSMUST00000178069 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s100-201ENSMUST00000178106 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s111-201ENSMUST00000178203 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s105-201ENSMUST00000178499 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s149-201ENSMUST00000178520 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s103-201ENSMUST00000178755 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s123-201ENSMUST00000178804 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s142-201ENSMUST00000178820 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s144-201ENSMUST00000178859 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s139-201ENSMUST00000178975 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s134-201ENSMUST00000178983 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s136-201ENSMUST00000179080 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 Gm25018-201ENSMUST00000179081 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s104-201ENSMUST00000179107 119 ntBASIC7.83□□□□□ -1.16
Hmgb3O54879 n-R5s113-201ENSMUST00000179143 119 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms