Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb3S4R1G7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
H2afb3S4R1G7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
H2afb3S4R1G7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb3S4R1G7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb3S4R1G7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
H2afb3S4R1G7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb3S4R1G7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Rps24-207ENSMUST00000224568 714 ntBASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb3S4R1G7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Gm45102-201ENSMUST00000207427 857 ntBASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.41■□□□□ 0.38
H2afb3S4R1G7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
H2afb3S4R1G7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb3S4R1G7 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.4■□□□□ 0.38
H2afb3S4R1G7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb3S4R1G7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
H2afb3S4R1G7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.4■□□□□ 0.38
H2afb3S4R1G7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb3S4R1G7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb3S4R1G7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb3S4R1G7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afb3S4R1G7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb3S4R1G7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.39■□□□□ 0.37
H2afb3S4R1G7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb3S4R1G7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb3S4R1G7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb3S4R1G7 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.39■□□□□ 0.37
H2afb3S4R1G7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.39■□□□□ 0.37
H2afb3S4R1G7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Gm14117-201ENSMUST00000122417 843 ntBASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb3S4R1G7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms