Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mrpl40Q9Z2Q5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrpl40Q9Z2Q5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl40Q9Z2Q5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Smad6-203ENSMUST00000179458 273 ntBASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Gm29257-201ENSMUST00000186115 639 ntBASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl40Q9Z2Q5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Gm10493-201ENSMUST00000097270 612 ntBASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl40Q9Z2Q5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mrpl40Q9Z2Q5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.27■□□□□ 0.67
Mrpl40Q9Z2Q5 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl40Q9Z2Q5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms