Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.82■□□□□ 0.76
Mbd1Q9Z2E2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.82■□□□□ 0.76
Mbd1Q9Z2E2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mbd1Q9Z2E2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mbd1Q9Z2E2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.82■□□□□ 0.76
Mbd1Q9Z2E2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mbd1Q9Z2E2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Mbd1Q9Z2E2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mbd1Q9Z2E2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.8■□□□□ 0.76
Mbd1Q9Z2E2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mbd1Q9Z2E2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Mbd1Q9Z2E2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mbd1Q9Z2E2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mbd1Q9Z2E2 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.8■□□□□ 0.76
Mbd1Q9Z2E2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd1Q9Z2E2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd1Q9Z2E2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd1Q9Z2E2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mbd1Q9Z2E2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mbd1Q9Z2E2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd1Q9Z2E2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd1Q9Z2E2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Gm9847-201ENSMUST00000052528 599 ntBASIC19.74■□□□□ 0.75
Mbd1Q9Z2E2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms