Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nr1h3Q9Z0Y9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nr1h3Q9Z0Y9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nr1h3Q9Z0Y9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nr1h3Q9Z0Y9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.12■□□□□ 0.97
Nr1h3Q9Z0Y9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nr1h3Q9Z0Y9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr1h3Q9Z0Y9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr1h3Q9Z0Y9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr1h3Q9Z0Y9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nr1h3Q9Z0Y9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr1h3Q9Z0Y9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr1h3Q9Z0Y9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nr1h3Q9Z0Y9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.1■□□□□ 0.97
Nr1h3Q9Z0Y9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 Gm7514-201ENSMUST00000209475 934 ntBASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nr1h3Q9Z0Y9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nr1h3Q9Z0Y9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nr1h3Q9Z0Y9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nr1h3Q9Z0Y9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nr1h3Q9Z0Y9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nr1h3Q9Z0Y9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nr1h3Q9Z0Y9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nr1h3Q9Z0Y9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Nr1h3Q9Z0Y9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr1h3Q9Z0Y9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr1h3Q9Z0Y9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr1h3Q9Z0Y9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr1h3Q9Z0Y9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nr1h3Q9Z0Y9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nr1h3Q9Z0Y9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr1h3Q9Z0Y9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr1h3Q9Z0Y9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr1h3Q9Z0Y9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr1h3Q9Z0Y9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 Gm27011-201ENSMUST00000182352 972 ntBASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr1h3Q9Z0Y9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Nr1h3Q9Z0Y9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms