Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh17Q9R100 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh17Q9R100 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdh17Q9R100 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.94■□□□□ 0.62
Cdh17Q9R100 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdh17Q9R100 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh17Q9R100 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh17Q9R100 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh17Q9R100 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh17Q9R100 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh17Q9R100 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh17Q9R100 Gm12922-201ENSMUST00000120626 809 ntBASIC18.92■□□□□ 0.62
Cdh17Q9R100 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh17Q9R100 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.92■□□□□ 0.62
Cdh17Q9R100 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh17Q9R100 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Cdh17Q9R100 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Golph3-205ENSMUST00000228671 2842 ntBASIC18.91■□□□□ 0.62
Cdh17Q9R100 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh17Q9R100 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdh17Q9R100 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.9■□□□□ 0.62
Cdh17Q9R100 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdh17Q9R100 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.9■□□□□ 0.62
Cdh17Q9R100 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh17Q9R100 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdh17Q9R100 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdh17Q9R100 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms