Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RpgrQ9R0X5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RpgrQ9R0X5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RpgrQ9R0X5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RpgrQ9R0X5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RpgrQ9R0X5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RpgrQ9R0X5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RpgrQ9R0X5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.58■□□□□ 0.73
RpgrQ9R0X5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RpgrQ9R0X5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RpgrQ9R0X5 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.58■□□□□ 0.72
RpgrQ9R0X5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RpgrQ9R0X5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.58■□□□□ 0.72
RpgrQ9R0X5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RpgrQ9R0X5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.58■□□□□ 0.72
RpgrQ9R0X5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.58■□□□□ 0.72
RpgrQ9R0X5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Gm12821-201ENSMUST00000120022 600 ntBASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RpgrQ9R0X5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RpgrQ9R0X5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RpgrQ9R0X5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RpgrQ9R0X5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RpgrQ9R0X5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RpgrQ9R0X5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RpgrQ9R0X5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RpgrQ9R0X5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RpgrQ9R0X5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RpgrQ9R0X5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RpgrQ9R0X5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RpgrQ9R0X5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RpgrQ9R0X5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RpgrQ9R0X5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.54■□□□□ 0.72
RpgrQ9R0X5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RpgrQ9R0X5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RpgrQ9R0X5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.54■□□□□ 0.72
RpgrQ9R0X5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RpgrQ9R0X5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RpgrQ9R0X5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RpgrQ9R0X5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RpgrQ9R0X5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RpgrQ9R0X5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RpgrQ9R0X5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RpgrQ9R0X5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RpgrQ9R0X5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RpgrQ9R0X5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms