Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.69■□□□□ 0.74
Msh5Q9QUM7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
Msh5Q9QUM7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.69■□□□□ 0.74
Msh5Q9QUM7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh5Q9QUM7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.69■□□□□ 0.74
Msh5Q9QUM7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh5Q9QUM7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh5Q9QUM7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh5Q9QUM7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Msh5Q9QUM7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh5Q9QUM7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh5Q9QUM7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.64■□□□□ 0.74
Msh5Q9QUM7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh5Q9QUM7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Msh5Q9QUM7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh5Q9QUM7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Msh5Q9QUM7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh5Q9QUM7 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.64■□□□□ 0.73
Msh5Q9QUM7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.64■□□□□ 0.73
Msh5Q9QUM7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
Msh5Q9QUM7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.64■□□□□ 0.73
Msh5Q9QUM7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh5Q9QUM7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Msh5Q9QUM7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Gm43371-201ENSMUST00000202838 1031 ntBASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms