Protein–RNA interactions for Protein: Q9JM61

Thsd1, Thrombospondin type-1 domain-containing protein 1, mousemouse

Predictions only

Length 851 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thsd1Q9JM61 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thsd1Q9JM61 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Thsd1Q9JM61 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.05■□□□□ 0.48
Thsd1Q9JM61 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.05■□□□□ 0.48
Thsd1Q9JM61 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.05■□□□□ 0.48
Thsd1Q9JM61 Spcs1-204ENSMUST00000226782 949 ntBASIC18.05■□□□□ 0.48
Thsd1Q9JM61 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.05■□□□□ 0.48
Thsd1Q9JM61 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Thsd1Q9JM61 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thsd1Q9JM61 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thsd1Q9JM61 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Gm10849-201ENSMUST00000100397 618 ntBASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Thsd1Q9JM61 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Thsd1Q9JM61 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.03■□□□□ 0.48
Thsd1Q9JM61 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thsd1Q9JM61 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thsd1Q9JM61 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thsd1Q9JM61 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thsd1Q9JM61 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Gm10129-202ENSMUST00000193100 1316 ntBASIC18■□□□□ 0.47
Thsd1Q9JM61 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18■□□□□ 0.47
Thsd1Q9JM61 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18■□□□□ 0.47
Thsd1Q9JM61 Gm18671-201ENSMUST00000214826 683 ntBASIC18■□□□□ 0.47
Thsd1Q9JM61 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thsd1Q9JM61 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Thsd1Q9JM61 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Thsd1Q9JM61 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thsd1Q9JM61 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thsd1Q9JM61 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thsd1Q9JM61 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Thsd1Q9JM61 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Thsd1Q9JM61 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Thsd1Q9JM61 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thsd1Q9JM61 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Thsd1Q9JM61 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Thsd1Q9JM61 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Thsd1Q9JM61 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thsd1Q9JM61 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thsd1Q9JM61 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Thsd1Q9JM61 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms