Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf13bQ9ET35 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf13bQ9ET35 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 BC021767-201ENSMUST00000126387 1716 ntBASIC15.29■□□□□ 0.04
Tnfrsf13bQ9ET35 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Gm9870-201ENSMUST00000063874 645 ntBASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 AA386476-201ENSMUST00000098781 1665 ntBASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf13bQ9ET35 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Tnfrsf13bQ9ET35 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf13bQ9ET35 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf13bQ9ET35 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf13bQ9ET35 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf13bQ9ET35 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tnfrsf13bQ9ET35 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tnfrsf13bQ9ET35 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf13bQ9ET35 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf13bQ9ET35 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf13bQ9ET35 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms