Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb3Q9ERD7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb3Q9ERD7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Tubb3Q9ERD7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb3Q9ERD7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.31■□□□□ 0.68
Tubb3Q9ERD7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb3Q9ERD7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb3Q9ERD7 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb3Q9ERD7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 Mir7075-201ENSMUST00000184187 82 ntBASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 Gm43530-201ENSMUST00000195920 274 ntBASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Tubb3Q9ERD7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Gm6139-201ENSMUST00000079261 882 ntBASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb3Q9ERD7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.27■□□□□ 0.68
Tubb3Q9ERD7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb3Q9ERD7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb3Q9ERD7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Tubb3Q9ERD7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.27■□□□□ 0.68
Tubb3Q9ERD7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.27■□□□□ 0.68
Tubb3Q9ERD7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb3Q9ERD7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb3Q9ERD7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Tubb3Q9ERD7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tubb3Q9ERD7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.25■□□□□ 0.67
Tubb3Q9ERD7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubb3Q9ERD7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubb3Q9ERD7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms