Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Upf1Q9EPU0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.59■■□□□ 1.21
Upf1Q9EPU0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.59■■□□□ 1.21
Upf1Q9EPU0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Upf1Q9EPU0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Upf1Q9EPU0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Upf1Q9EPU0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Upf1Q9EPU0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Upf1Q9EPU0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Upf1Q9EPU0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Upf1Q9EPU0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC22.58■■□□□ 1.21
Upf1Q9EPU0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC22.58■■□□□ 1.21
Upf1Q9EPU0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Upf1Q9EPU0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Upf1Q9EPU0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Upf1Q9EPU0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Upf1Q9EPU0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Upf1Q9EPU0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Upf1Q9EPU0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Upf1Q9EPU0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Upf1Q9EPU0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC22.56■■□□□ 1.2
Upf1Q9EPU0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
Upf1Q9EPU0 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.55■■□□□ 1.2
Upf1Q9EPU0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.55■■□□□ 1.2
Upf1Q9EPU0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Upf1Q9EPU0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Upf1Q9EPU0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.55■■□□□ 1.2
Upf1Q9EPU0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC22.55■■□□□ 1.2
Upf1Q9EPU0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Upf1Q9EPU0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Upf1Q9EPU0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Upf1Q9EPU0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Upf1Q9EPU0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Upf1Q9EPU0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Upf1Q9EPU0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
Upf1Q9EPU0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Upf1Q9EPU0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Upf1Q9EPU0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Upf1Q9EPU0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Upf1Q9EPU0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
Upf1Q9EPU0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Upf1Q9EPU0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Upf1Q9EPU0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.51■■□□□ 1.19
Upf1Q9EPU0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Upf1Q9EPU0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Upf1Q9EPU0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Upf1Q9EPU0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Upf1Q9EPU0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Upf1Q9EPU0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Upf1Q9EPU0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC22.5■■□□□ 1.19
Upf1Q9EPU0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Upf1Q9EPU0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.5■■□□□ 1.19
Upf1Q9EPU0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Gm9103-201ENSMUST00000119371 405 ntBASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 AC159205.3-201ENSMUST00000224614 874 ntBASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Upf1Q9EPU0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Upf1Q9EPU0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upf1Q9EPU0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Upf1Q9EPU0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.47■■□□□ 1.19
Upf1Q9EPU0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upf1Q9EPU0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Upf1Q9EPU0 Gm2399-201ENSMUST00000104944 225 ntBASIC22.46■■□□□ 1.19
Upf1Q9EPU0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Upf1Q9EPU0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.46■■□□□ 1.19
Upf1Q9EPU0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Upf1Q9EPU0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms