Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3a3Q9D554 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a3Q9D554 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a3Q9D554 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sf3a3Q9D554 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a3Q9D554 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a3Q9D554 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a3Q9D554 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a3Q9D554 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sf3a3Q9D554 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a3Q9D554 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a3Q9D554 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a3Q9D554 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms