Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cap2-205ENSMUST00000225824 1634 ntBASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim42Q9D2H5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim42Q9D2H5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Gm10399-202ENSMUST00000202768 748 ntBASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim42Q9D2H5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Trim42Q9D2H5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim42Q9D2H5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim42Q9D2H5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim42Q9D2H5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim42Q9D2H5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Trim42Q9D2H5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim42Q9D2H5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim42Q9D2H5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim42Q9D2H5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim42Q9D2H5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim42Q9D2H5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim42Q9D2H5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Trim42Q9D2H5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim42Q9D2H5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Gm7143-201ENSMUST00000222811 859 ntBASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim42Q9D2H5 Golph3-205ENSMUST00000228671 2842 ntBASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim42Q9D2H5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Mir6236-201ENSMUST00000184437 123 ntBASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim42Q9D2H5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim42Q9D2H5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms