Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.5■□□□□ 0.55
Upk1aQ9D132 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk1aQ9D132 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Upk1aQ9D132 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk1aQ9D132 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk1aQ9D132 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Upk1aQ9D132 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upk1aQ9D132 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Upk1aQ9D132 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.48■□□□□ 0.55
Upk1aQ9D132 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.48■□□□□ 0.55
Upk1aQ9D132 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upk1aQ9D132 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Gm43530-201ENSMUST00000195920 274 ntBASIC18.47■□□□□ 0.55
Upk1aQ9D132 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.47■□□□□ 0.55
Upk1aQ9D132 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upk1aQ9D132 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk1aQ9D132 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Upk1aQ9D132 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk1aQ9D132 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.45■□□□□ 0.54
Upk1aQ9D132 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Upk1aQ9D132 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.45■□□□□ 0.54
Upk1aQ9D132 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk1aQ9D132 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Upk1aQ9D132 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk1aQ9D132 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Upk1aQ9D132 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk1aQ9D132 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Upk1aQ9D132 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk1aQ9D132 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Upk1aQ9D132 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.44■□□□□ 0.54
Upk1aQ9D132 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk1aQ9D132 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.44■□□□□ 0.54
Upk1aQ9D132 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk1aQ9D132 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Upk1aQ9D132 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.44■□□□□ 0.54
Upk1aQ9D132 Grk6-206ENSMUST00000224995 2971 ntBASIC18.44■□□□□ 0.54
Upk1aQ9D132 AA386476-201ENSMUST00000098781 1665 ntBASIC18.44■□□□□ 0.54
Upk1aQ9D132 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.43■□□□□ 0.54
Upk1aQ9D132 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Upk1aQ9D132 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms