Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mms19Q9D071 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mms19Q9D071 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mms19Q9D071 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mms19Q9D071 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mms19Q9D071 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mms19Q9D071 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mms19Q9D071 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mms19Q9D071 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mms19Q9D071 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mms19Q9D071 Gm40848-201ENSMUST00000221998 324 ntBASIC20.77■□□□□ 0.92
Mms19Q9D071 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Mms19Q9D071 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Mms19Q9D071 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mms19Q9D071 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mms19Q9D071 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Mms19Q9D071 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mms19Q9D071 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mms19Q9D071 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mms19Q9D071 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.76■□□□□ 0.91
Mms19Q9D071 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mms19Q9D071 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Mms19Q9D071 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Mms19Q9D071 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mms19Q9D071 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Mms19Q9D071 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.76■□□□□ 0.91
Mms19Q9D071 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mms19Q9D071 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mms19Q9D071 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mms19Q9D071 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mms19Q9D071 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.75■□□□□ 0.91
Mms19Q9D071 Gm18284-201ENSMUST00000172604 624 ntBASIC20.75■□□□□ 0.91
Mms19Q9D071 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mms19Q9D071 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mms19Q9D071 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mms19Q9D071 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.74■□□□□ 0.91
Mms19Q9D071 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mms19Q9D071 Gm11421-201ENSMUST00000122124 294 ntBASIC20.74■□□□□ 0.91
Mms19Q9D071 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mms19Q9D071 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Mms19Q9D071 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.74■□□□□ 0.91
Mms19Q9D071 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mms19Q9D071 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mms19Q9D071 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mms19Q9D071 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mms19Q9D071 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mms19Q9D071 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Mms19Q9D071 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mms19Q9D071 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Mms19Q9D071 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.73■□□□□ 0.91
Mms19Q9D071 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mms19Q9D071 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mms19Q9D071 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mms19Q9D071 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Mms19Q9D071 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Mms19Q9D071 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mms19Q9D071 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mms19Q9D071 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mms19Q9D071 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
Mms19Q9D071 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.72■□□□□ 0.91
Mms19Q9D071 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.72■□□□□ 0.91
Mms19Q9D071 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 AA386476-201ENSMUST00000098781 1665 ntBASIC20.72■□□□□ 0.91
Mms19Q9D071 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Mms19Q9D071 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mms19Q9D071 Iqck-206ENSMUST00000208658 2891 ntBASIC20.71■□□□□ 0.91
Mms19Q9D071 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mms19Q9D071 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mms19Q9D071 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mms19Q9D071 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mms19Q9D071 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mms19Q9D071 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.71■□□□□ 0.91
Mms19Q9D071 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.71■□□□□ 0.91
Mms19Q9D071 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Mms19Q9D071 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mms19Q9D071 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Mms19Q9D071 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Mms19Q9D071 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mms19Q9D071 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Mms19Q9D071 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms