Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ssr1Q9CY50 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Gm14117-201ENSMUST00000122417 843 ntBASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr1Q9CY50 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssr1Q9CY50 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssr1Q9CY50 Rps24-207ENSMUST00000224568 714 ntBASIC20.95■□□□□ 0.94
Ssr1Q9CY50 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ssr1Q9CY50 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ssr1Q9CY50 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssr1Q9CY50 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssr1Q9CY50 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssr1Q9CY50 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ssr1Q9CY50 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssr1Q9CY50 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ssr1Q9CY50 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssr1Q9CY50 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ssr1Q9CY50 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.93■□□□□ 0.94
Ssr1Q9CY50 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssr1Q9CY50 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssr1Q9CY50 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.92■□□□□ 0.94
Ssr1Q9CY50 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ssr1Q9CY50 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssr1Q9CY50 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssr1Q9CY50 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ssr1Q9CY50 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ssr1Q9CY50 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ssr1Q9CY50 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Ssr1Q9CY50 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.91■□□□□ 0.94
Ssr1Q9CY50 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssr1Q9CY50 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssr1Q9CY50 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms