Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnot11Q9CWN7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnot11Q9CWN7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnot11Q9CWN7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnot11Q9CWN7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cnot11Q9CWN7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnot11Q9CWN7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnot11Q9CWN7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnot11Q9CWN7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.86■□□□□ 0.61
Cnot11Q9CWN7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnot11Q9CWN7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnot11Q9CWN7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cnot11Q9CWN7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cnot11Q9CWN7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cnot11Q9CWN7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot11Q9CWN7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot11Q9CWN7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot11Q9CWN7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot11Q9CWN7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot11Q9CWN7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot11Q9CWN7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot11Q9CWN7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot11Q9CWN7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.83■□□□□ 0.6
Cnot11Q9CWN7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cnot11Q9CWN7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cnot11Q9CWN7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cnot11Q9CWN7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Gm21956-201ENSMUST00000179946 522 ntBASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot11Q9CWN7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot11Q9CWN7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot11Q9CWN7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnot11Q9CWN7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnot11Q9CWN7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnot11Q9CWN7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cnot11Q9CWN7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cnot11Q9CWN7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnot11Q9CWN7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.79■□□□□ 0.6
Cnot11Q9CWN7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
Cnot11Q9CWN7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms