Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rtn4rQ99PI8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rtn4rQ99PI8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rtn4rQ99PI8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Gm40848-201ENSMUST00000221998 324 ntBASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rtn4rQ99PI8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rtn4rQ99PI8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtn4rQ99PI8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rQ99PI8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rQ99PI8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtn4rQ99PI8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rtn4rQ99PI8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rQ99PI8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rQ99PI8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rQ99PI8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rQ99PI8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rtn4rQ99PI8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rQ99PI8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.16■□□□□ 0.34
Rtn4rQ99PI8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtn4rQ99PI8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rQ99PI8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rtn4rQ99PI8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.15■□□□□ 0.34
Rtn4rQ99PI8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.15■□□□□ 0.34
Rtn4rQ99PI8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rQ99PI8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rtn4rQ99PI8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rQ99PI8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtn4rQ99PI8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rQ99PI8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rQ99PI8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rtn4rQ99PI8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.14■□□□□ 0.33
Rtn4rQ99PI8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rQ99PI8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rQ99PI8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rQ99PI8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtn4rQ99PI8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.13■□□□□ 0.33
Rtn4rQ99PI8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Gm43060-201ENSMUST00000200621 289 ntBASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn4rQ99PI8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Gm11421-201ENSMUST00000122124 294 ntBASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn4rQ99PI8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn4rQ99PI8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn4rQ99PI8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn4rQ99PI8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn4rQ99PI8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn4rQ99PI8 AA386476-201ENSMUST00000098781 1665 ntBASIC17.1■□□□□ 0.33
Rtn4rQ99PI8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn4rQ99PI8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rtn4rQ99PI8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Rtn4rQ99PI8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms