Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cntnap4Q99P47 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cntnap4Q99P47 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cntnap4Q99P47 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cntnap4Q99P47 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cntnap4Q99P47 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.94■□□□□ 0.94
Cntnap4Q99P47 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cntnap4Q99P47 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.93■□□□□ 0.94
Cntnap4Q99P47 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap4Q99P47 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap4Q99P47 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.93■□□□□ 0.94
Cntnap4Q99P47 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap4Q99P47 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Cntnap4Q99P47 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap4Q99P47 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap4Q99P47 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap4Q99P47 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap4Q99P47 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cntnap4Q99P47 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap4Q99P47 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.92■□□□□ 0.94
Cntnap4Q99P47 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
Cntnap4Q99P47 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.92■□□□□ 0.94
Cntnap4Q99P47 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 AV356131-201ENSMUST00000206201 750 ntBASIC20.91■□□□□ 0.94
Cntnap4Q99P47 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cntnap4Q99P47 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Gm9988-201ENSMUST00000069786 435 ntBASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap4Q99P47 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Cntnap4Q99P47 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cntnap4Q99P47 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cntnap4Q99P47 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
Cntnap4Q99P47 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap4Q99P47 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap4Q99P47 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntnap4Q99P47 Mir7071-201ENSMUST00000184847 69 ntBASIC20.88■□□□□ 0.93
Cntnap4Q99P47 Gm42778-201ENSMUST00000199644 553 ntBASIC20.88■□□□□ 0.93
Cntnap4Q99P47 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.88■□□□□ 0.93
Cntnap4Q99P47 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap4Q99P47 Reep4-203ENSMUST00000226563 1444 ntBASIC20.87■□□□□ 0.93
Cntnap4Q99P47 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.87■□□□□ 0.93
Cntnap4Q99P47 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cntnap4Q99P47 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap4Q99P47 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntnap4Q99P47 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cntnap4Q99P47 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntnap4Q99P47 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms