Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col25a1Q99MQ5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.27■□□□□ 0.83
Col25a1Q99MQ5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Gm6211-202ENSMUST00000167849 925 ntBASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Gm10231-201ENSMUST00000181584 441 ntBASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Gm10175-202ENSMUST00000208752 441 ntBASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col25a1Q99MQ5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col25a1Q99MQ5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col25a1Q99MQ5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col25a1Q99MQ5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.25■□□□□ 0.83
Col25a1Q99MQ5 Gm10517-202ENSMUST00000192970 758 ntBASIC20.25■□□□□ 0.83
Col25a1Q99MQ5 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.25■□□□□ 0.83
Col25a1Q99MQ5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col25a1Q99MQ5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Gm5643-201ENSMUST00000117081 966 ntBASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Col25a1Q99MQ5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col25a1Q99MQ5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.23■□□□□ 0.83
Col25a1Q99MQ5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col25a1Q99MQ5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col25a1Q99MQ5 Gm27275-201ENSMUST00000184318 272 ntBASIC20.23■□□□□ 0.83
Col25a1Q99MQ5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col25a1Q99MQ5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col25a1Q99MQ5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col25a1Q99MQ5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Col25a1Q99MQ5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col25a1Q99MQ5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Col25a1Q99MQ5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Col25a1Q99MQ5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms