Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf111Q99ML9 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.83■□□□□ 0.6
Rnf111Q99ML9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Gm12922-201ENSMUST00000120626 809 ntBASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Golgb1-201ENSMUST00000023534 498 ntBASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf111Q99ML9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf111Q99ML9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf111Q99ML9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Rnf111Q99ML9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Gm9847-201ENSMUST00000052528 599 ntBASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf111Q99ML9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf111Q99ML9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf111Q99ML9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf111Q99ML9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.77■□□□□ 0.59
Rnf111Q99ML9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf111Q99ML9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms