Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SncaipQ99ME3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SncaipQ99ME3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SncaipQ99ME3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SncaipQ99ME3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SncaipQ99ME3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaipQ99ME3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Iqck-206ENSMUST00000208658 2891 ntBASIC20.1■□□□□ 0.81
SncaipQ99ME3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaipQ99ME3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SncaipQ99ME3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SncaipQ99ME3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.09■□□□□ 0.81
SncaipQ99ME3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SncaipQ99ME3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
SncaipQ99ME3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SncaipQ99ME3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SncaipQ99ME3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SncaipQ99ME3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SncaipQ99ME3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SncaipQ99ME3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SncaipQ99ME3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.07■□□□□ 0.8
SncaipQ99ME3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SncaipQ99ME3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SncaipQ99ME3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SncaipQ99ME3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SncaipQ99ME3 Gm8493-201ENSMUST00000196881 489 ntBASIC20.07■□□□□ 0.8
SncaipQ99ME3 Gm43173-201ENSMUST00000202246 593 ntBASIC20.07■□□□□ 0.8
SncaipQ99ME3 Gm6139-201ENSMUST00000079261 882 ntBASIC20.07■□□□□ 0.8
SncaipQ99ME3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SncaipQ99ME3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SncaipQ99ME3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SncaipQ99ME3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.07■□□□□ 0.8
SncaipQ99ME3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SncaipQ99ME3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SncaipQ99ME3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SncaipQ99ME3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.06■□□□□ 0.8
SncaipQ99ME3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SncaipQ99ME3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SncaipQ99ME3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.06■□□□□ 0.8
SncaipQ99ME3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SncaipQ99ME3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SncaipQ99ME3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.05■□□□□ 0.8
SncaipQ99ME3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SncaipQ99ME3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SncaipQ99ME3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SncaipQ99ME3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SncaipQ99ME3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.04■□□□□ 0.8
SncaipQ99ME3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SncaipQ99ME3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.04■□□□□ 0.8
SncaipQ99ME3 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.04■□□□□ 0.8
SncaipQ99ME3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SncaipQ99ME3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SncaipQ99ME3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SncaipQ99ME3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SncaipQ99ME3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SncaipQ99ME3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SncaipQ99ME3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SncaipQ99ME3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.03■□□□□ 0.8
SncaipQ99ME3 Serp2-204ENSMUST00000228055 705 ntBASIC20.03■□□□□ 0.8
SncaipQ99ME3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SncaipQ99ME3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SncaipQ99ME3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SncaipQ99ME3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SncaipQ99ME3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SncaipQ99ME3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SncaipQ99ME3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SncaipQ99ME3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SncaipQ99ME3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms