Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr3Q99MB1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tlr3Q99MB1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tlr3Q99MB1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
Tlr3Q99MB1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.89■□□□□ 0.94
Tlr3Q99MB1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Gm43017-201ENSMUST00000198296 752 ntBASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr3Q99MB1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tlr3Q99MB1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.87■□□□□ 0.93
Tlr3Q99MB1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tlr3Q99MB1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Gm8493-201ENSMUST00000196881 489 ntBASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tlr3Q99MB1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tlr3Q99MB1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tlr3Q99MB1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.83■□□□□ 0.93
Tlr3Q99MB1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Tlr3Q99MB1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Tlr3Q99MB1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tlr3Q99MB1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tlr3Q99MB1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tlr3Q99MB1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.83■□□□□ 0.92
Tlr3Q99MB1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tlr3Q99MB1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.82■□□□□ 0.92
Tlr3Q99MB1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tlr3Q99MB1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tlr3Q99MB1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tlr3Q99MB1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tlr3Q99MB1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms