Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Cdca3Q99M54 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdca3Q99M54 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdca3Q99M54 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.01■□□□□ 0.47
Cdca3Q99M54 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdca3Q99M54 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Gm26571-201ENSMUST00000181399 666 ntBASIC18■□□□□ 0.47
Cdca3Q99M54 Gm43060-201ENSMUST00000200621 289 ntBASIC18■□□□□ 0.47
Cdca3Q99M54 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18■□□□□ 0.47
Cdca3Q99M54 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdca3Q99M54 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdca3Q99M54 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdca3Q99M54 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Cdca3Q99M54 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Gm42642-201ENSMUST00000200683 355 ntBASIC17.99■□□□□ 0.47
Cdca3Q99M54 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Golph3-202ENSMUST00000226517 2359 ntBASIC17.99■□□□□ 0.47
Cdca3Q99M54 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdca3Q99M54 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdca3Q99M54 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdca3Q99M54 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdca3Q99M54 Gm12251-201ENSMUST00000117893 792 ntBASIC17.98■□□□□ 0.47
Cdca3Q99M54 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdca3Q99M54 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdca3Q99M54 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdca3Q99M54 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdca3Q99M54 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Cdca3Q99M54 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.97■□□□□ 0.47
Cdca3Q99M54 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.97■□□□□ 0.47
Cdca3Q99M54 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.97■□□□□ 0.47
Cdca3Q99M54 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdca3Q99M54 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.96■□□□□ 0.47
Cdca3Q99M54 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cdca3Q99M54 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdca3Q99M54 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.96■□□□□ 0.47
Cdca3Q99M54 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdca3Q99M54 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Cdca3Q99M54 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdca3Q99M54 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cdca3Q99M54 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.95■□□□□ 0.46
Cdca3Q99M54 Iqck-206ENSMUST00000208658 2891 ntBASIC17.95■□□□□ 0.46
Cdca3Q99M54 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdca3Q99M54 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdca3Q99M54 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdca3Q99M54 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdca3Q99M54 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdca3Q99M54 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms