Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd2Q99JR8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd2Q99JR8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd2Q99JR8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd2Q99JR8 Gm5408-201ENSMUST00000197998 747 ntBASIC19.77■□□□□ 0.76
Smarcd2Q99JR8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd2Q99JR8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd2Q99JR8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Smarcd2Q99JR8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Gm20760-201ENSMUST00000179197 648 ntBASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Smarcd2Q99JR8 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.75■□□□□ 0.75
Smarcd2Q99JR8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd2Q99JR8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd2Q99JR8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smarcd2Q99JR8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd2Q99JR8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Smarcd2Q99JR8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd2Q99JR8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.75■□□□□ 0.75
Smarcd2Q99JR8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Gm12527-201ENSMUST00000117967 564 ntBASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Smarcd2Q99JR8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd2Q99JR8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd2Q99JR8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd2Q99JR8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms