Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc4Q99J62 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Gm13148-201ENSMUST00000118892 745 ntBASIC22.48■■□□□ 1.19
Rfc4Q99J62 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfc4Q99J62 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rfc4Q99J62 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfc4Q99J62 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfc4Q99J62 Gm8520-201ENSMUST00000186517 868 ntBASIC22.47■■□□□ 1.19
Rfc4Q99J62 Gm38205-201ENSMUST00000192243 258 ntBASIC22.47■■□□□ 1.19
Rfc4Q99J62 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.47■■□□□ 1.19
Rfc4Q99J62 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfc4Q99J62 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfc4Q99J62 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.47■■□□□ 1.19
Rfc4Q99J62 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Rfc4Q99J62 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Rfc4Q99J62 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.46■■□□□ 1.19
Rfc4Q99J62 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rfc4Q99J62 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.46■■□□□ 1.19
Rfc4Q99J62 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rfc4Q99J62 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rfc4Q99J62 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rfc4Q99J62 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Rfc4Q99J62 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rfc4Q99J62 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.46■■□□□ 1.19
Rfc4Q99J62 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rfc4Q99J62 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Rfc4Q99J62 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rfc4Q99J62 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.45■■□□□ 1.18
Rfc4Q99J62 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rfc4Q99J62 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rfc4Q99J62 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Rfc4Q99J62 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rfc4Q99J62 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rfc4Q99J62 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rfc4Q99J62 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Rfc4Q99J62 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rfc4Q99J62 Gm6420-201ENSMUST00000193885 723 ntBASIC22.44■■□□□ 1.18
Rfc4Q99J62 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.44■■□□□ 1.18
Rfc4Q99J62 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.44■■□□□ 1.18
Rfc4Q99J62 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.44■■□□□ 1.18
Rfc4Q99J62 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Rfc4Q99J62 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rfc4Q99J62 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rfc4Q99J62 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rfc4Q99J62 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rfc4Q99J62 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.43■■□□□ 1.18
Rfc4Q99J62 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.43■■□□□ 1.18
Rfc4Q99J62 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rfc4Q99J62 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rfc4Q99J62 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rfc4Q99J62 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.42■■□□□ 1.18
Rfc4Q99J62 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc4Q99J62 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Rfc4Q99J62 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc4Q99J62 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms