Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1dQ99246 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1dQ99246 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.41■□□□□ 0.7
Cacna1dQ99246 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cacna1dQ99246 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1dQ99246 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1dQ99246 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1dQ99246 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1dQ99246 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Gm7514-201ENSMUST00000209475 934 ntBASIC19.4■□□□□ 0.7
Cacna1dQ99246 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1dQ99246 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.4■□□□□ 0.7
Cacna1dQ99246 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Cacna1dQ99246 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1dQ99246 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1dQ99246 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.39■□□□□ 0.69
Cacna1dQ99246 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1dQ99246 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1dQ99246 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1dQ99246 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cacna1dQ99246 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1dQ99246 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.39■□□□□ 0.69
Cacna1dQ99246 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.39■□□□□ 0.69
Cacna1dQ99246 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1dQ99246 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1dQ99246 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1dQ99246 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1dQ99246 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cacna1dQ99246 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cacna1dQ99246 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1dQ99246 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1dQ99246 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1dQ99246 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1dQ99246 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1dQ99246 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1dQ99246 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.37■□□□□ 0.69
Cacna1dQ99246 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1dQ99246 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1dQ99246 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1dQ99246 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1dQ99246 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.37■□□□□ 0.69
Cacna1dQ99246 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.36■□□□□ 0.69
Cacna1dQ99246 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1dQ99246 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1dQ99246 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1dQ99246 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1dQ99246 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.35■□□□□ 0.69
Cacna1dQ99246 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1dQ99246 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1dQ99246 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cacna1dQ99246 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.35■□□□□ 0.69
Cacna1dQ99246 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Gm10602-201ENSMUST00000098239 609 ntBASIC19.34■□□□□ 0.69
Cacna1dQ99246 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.34■□□□□ 0.69
Cacna1dQ99246 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1dQ99246 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cacna1dQ99246 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Cacna1dQ99246 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1dQ99246 Gm13146-201ENSMUST00000118508 780 ntBASIC19.33■□□□□ 0.69
Cacna1dQ99246 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1dQ99246 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cacna1dQ99246 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1dQ99246 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1dQ99246 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1dQ99246 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms