Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc1bQ920F6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
Smc1bQ920F6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc1bQ920F6 Gm9988-201ENSMUST00000069786 435 ntBASIC22.34■■□□□ 1.17
Smc1bQ920F6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc1bQ920F6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc1bQ920F6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc1bQ920F6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Smc1bQ920F6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc1bQ920F6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc1bQ920F6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Smc1bQ920F6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc1bQ920F6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Smc1bQ920F6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc1bQ920F6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Smc1bQ920F6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.33■■□□□ 1.17
Smc1bQ920F6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Smc1bQ920F6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc1bQ920F6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc1bQ920F6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc1bQ920F6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc1bQ920F6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc1bQ920F6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc1bQ920F6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.32■■□□□ 1.16
Smc1bQ920F6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc1bQ920F6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.31■■□□□ 1.16
Smc1bQ920F6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.31■■□□□ 1.16
Smc1bQ920F6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc1bQ920F6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Gm12441-201ENSMUST00000121806 588 ntBASIC22.3■■□□□ 1.16
Smc1bQ920F6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.3■■□□□ 1.16
Smc1bQ920F6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc1bQ920F6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Smc1bQ920F6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc1bQ920F6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc1bQ920F6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Smc1bQ920F6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc1bQ920F6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.29■■□□□ 1.16
Smc1bQ920F6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc1bQ920F6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc1bQ920F6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc1bQ920F6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc1bQ920F6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc1bQ920F6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Smc1bQ920F6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Smc1bQ920F6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc1bQ920F6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Gm13234-201ENSMUST00000120010 747 ntBASIC22.27■■□□□ 1.16
Smc1bQ920F6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc1bQ920F6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Smc1bQ920F6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc1bQ920F6 Golph3-202ENSMUST00000226517 2359 ntBASIC22.26■■□□□ 1.15
Smc1bQ920F6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc1bQ920F6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc1bQ920F6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Smc1bQ920F6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Smc1bQ920F6 Gm10653-202ENSMUST00000139570 835 ntBASIC22.26■■□□□ 1.15
Smc1bQ920F6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.26■■□□□ 1.15
Smc1bQ920F6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Smc1bQ920F6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms