Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha6Q91Y14 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdha6Q91Y14 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha6Q91Y14 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha6Q91Y14 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha6Q91Y14 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha6Q91Y14 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Gm9847-201ENSMUST00000052528 599 ntBASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha6Q91Y14 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha6Q91Y14 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha6Q91Y14 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha6Q91Y14 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdha6Q91Y14 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha6Q91Y14 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha6Q91Y14 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.34■□□□□ 0.69
Pcdha6Q91Y14 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha6Q91Y14 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha6Q91Y14 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Pcdha6Q91Y14 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha6Q91Y14 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha6Q91Y14 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha6Q91Y14 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha6Q91Y14 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha6Q91Y14 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha6Q91Y14 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha6Q91Y14 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha6Q91Y14 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha6Q91Y14 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdha6Q91Y14 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdha6Q91Y14 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha6Q91Y14 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha6Q91Y14 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha6Q91Y14 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha6Q91Y14 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha6Q91Y14 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha6Q91Y14 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms