Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.89■□□□□ 0.62
Pcdha8Q91Y12 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.89■□□□□ 0.62
Pcdha8Q91Y12 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Pcdha8Q91Y12 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Pcdha8Q91Y12 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pcdha8Q91Y12 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Gm43137-201ENSMUST00000198052 594 ntBASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha8Q91Y12 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdha8Q91Y12 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Gm15039-201ENSMUST00000118914 875 ntBASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdha8Q91Y12 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha8Q91Y12 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha8Q91Y12 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha8Q91Y12 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha8Q91Y12 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdha8Q91Y12 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha8Q91Y12 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdha8Q91Y12 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha8Q91Y12 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha8Q91Y12 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdha8Q91Y12 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdha8Q91Y12 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdha8Q91Y12 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha8Q91Y12 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdha8Q91Y12 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha8Q91Y12 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha8Q91Y12 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha8Q91Y12 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdha8Q91Y12 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Gm12821-201ENSMUST00000120022 600 ntBASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha8Q91Y12 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha8Q91Y12 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms