Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga3Q91XY5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhga3Q91XY5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhga3Q91XY5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdhga3Q91XY5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga3Q91XY5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga3Q91XY5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga3Q91XY5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga3Q91XY5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga3Q91XY5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.21■□□□□ 0.34
Pcdhga3Q91XY5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhga3Q91XY5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga3Q91XY5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga3Q91XY5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.18■□□□□ 0.34
Pcdhga3Q91XY5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.17■□□□□ 0.34
Pcdhga3Q91XY5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga3Q91XY5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Gm21956-201ENSMUST00000179946 522 ntBASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms