Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb1Q91XX8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb1Q91XX8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Gm29257-201ENSMUST00000186115 639 ntBASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.23■□□□□ 0.83
Pcdhgb1Q91XX8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Gm10849-201ENSMUST00000100397 618 ntBASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Gm42778-201ENSMUST00000199644 553 ntBASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhgb1Q91XX8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Gm10033-202ENSMUST00000211874 928 ntBASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Gm18671-201ENSMUST00000214826 683 ntBASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb1Q91XX8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Gm27405-201ENSMUST00000184201 112 ntBASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb1Q91XX8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb1Q91XX8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb1Q91XX8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 Gm27801-201ENSMUST00000184174 223 ntBASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhgb1Q91XX8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms