Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb21Q91V48 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb21Q91V48 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb21Q91V48 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb21Q91V48 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb21Q91V48 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb21Q91V48 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb21Q91V48 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb21Q91V48 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Smad6-203ENSMUST00000179458 273 ntBASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Gm26833-201ENSMUST00000180899 440 ntBASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Gm43017-201ENSMUST00000198296 752 ntBASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb21Q91V48 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Pcdhb21Q91V48 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Gm11421-201ENSMUST00000122124 294 ntBASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb21Q91V48 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb21Q91V48 AA386476-201ENSMUST00000098781 1665 ntBASIC19.18■□□□□ 0.66
Pcdhb21Q91V48 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb21Q91V48 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb21Q91V48 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms