Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rab40cQ8VHQ4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rab40cQ8VHQ4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rab40cQ8VHQ4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rab40cQ8VHQ4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Gm45444-201ENSMUST00000211394 898 ntBASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab40cQ8VHQ4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab40cQ8VHQ4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rab40cQ8VHQ4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms