Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc71Q8VEG0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Gm6211-202ENSMUST00000167849 925 ntBASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc71Q8VEG0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc71Q8VEG0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc71Q8VEG0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.29■□□□□ 0.84
Ccdc71Q8VEG0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc71Q8VEG0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc71Q8VEG0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccdc71Q8VEG0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc71Q8VEG0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc71Q8VEG0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc71Q8VEG0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc71Q8VEG0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc71Q8VEG0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc71Q8VEG0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc71Q8VEG0 Gm22240-201ENSMUST00000175225 82 ntBASIC20.27■□□□□ 0.84
Ccdc71Q8VEG0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc71Q8VEG0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc71Q8VEG0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc71Q8VEG0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc71Q8VEG0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.83
Ccdc71Q8VEG0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc71Q8VEG0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc71Q8VEG0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc71Q8VEG0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc71Q8VEG0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc71Q8VEG0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccdc71Q8VEG0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc71Q8VEG0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc71Q8VEG0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc71Q8VEG0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc71Q8VEG0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Gm8520-201ENSMUST00000186517 868 ntBASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Gm20049-201ENSMUST00000219950 730 ntBASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc71Q8VEG0 Gm7860-201ENSMUST00000121190 879 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms