Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uhrf1Q8VDF2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uhrf1Q8VDF2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.22■□□□□ 0.83
Uhrf1Q8VDF2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Uhrf1Q8VDF2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Uhrf1Q8VDF2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Uhrf1Q8VDF2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Uhrf1Q8VDF2 Gm13168-201ENSMUST00000121771 632 ntBASIC20.2■□□□□ 0.82
Uhrf1Q8VDF2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Uhrf1Q8VDF2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Uhrf1Q8VDF2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Uhrf1Q8VDF2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Uhrf1Q8VDF2 AA386476-201ENSMUST00000098781 1665 ntBASIC20.19■□□□□ 0.82
Uhrf1Q8VDF2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uhrf1Q8VDF2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.19■□□□□ 0.82
Uhrf1Q8VDF2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Uhrf1Q8VDF2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uhrf1Q8VDF2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Uhrf1Q8VDF2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Uhrf1Q8VDF2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.19■□□□□ 0.82
Uhrf1Q8VDF2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.18■□□□□ 0.82
Uhrf1Q8VDF2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Uhrf1Q8VDF2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 Gm37856-201ENSMUST00000191634 999 ntBASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Uhrf1Q8VDF2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.15■□□□□ 0.82
Uhrf1Q8VDF2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Uhrf1Q8VDF2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Uhrf1Q8VDF2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.14■□□□□ 0.81
Uhrf1Q8VDF2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.13■□□□□ 0.81
Uhrf1Q8VDF2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Uhrf1Q8VDF2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Uhrf1Q8VDF2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.13■□□□□ 0.81
Uhrf1Q8VDF2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
Uhrf1Q8VDF2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Uhrf1Q8VDF2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.12■□□□□ 0.81
Uhrf1Q8VDF2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Uhrf1Q8VDF2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Uhrf1Q8VDF2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Uhrf1Q8VDF2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Uhrf1Q8VDF2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.12■□□□□ 0.81
Uhrf1Q8VDF2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Uhrf1Q8VDF2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Uhrf1Q8VDF2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms